Presenter Information

Location

https://www.kennesaw.edu/ccse/events/computing-showcase/sp26-cday-program.php

Document Type

Event

Start Date

22-4-2026 4:00 PM

Description

We study whether topological loss-based constraints improve multidomain whole-chain protein structure prediction beyond the ColabFold baseline by better preserving the topologies of folded proteins. We benchmark against Wasserstein metrics with our own virtual persistence and RKHS semi-metric constraints as well as higher-order virtual persistence diagrams.

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Apr 22nd, 4:00 PM

GRP-02-199 Topological Constraints for Protein Folding

https://www.kennesaw.edu/ccse/events/computing-showcase/sp26-cday-program.php

We study whether topological loss-based constraints improve multidomain whole-chain protein structure prediction beyond the ColabFold baseline by better preserving the topologies of folded proteins. We benchmark against Wasserstein metrics with our own virtual persistence and RKHS semi-metric constraints as well as higher-order virtual persistence diagrams.